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Table 1 Cotton research using single-cell RNA sequencing

From: Single-cell RNA sequencing opens a new era for cotton genomic research and gene functional analysis

Year

Cotton species

Targeted tissues/organs/cells

Goal of research

References

2022

G. hirsutum

Cotton fiber

Fate determination control of an individual fiber cell initiation

(Qin et al., 2022)

2023

G. hirsutum

Cotton fiber

Cell-specific clock-controlled gene expression program regulates rhythmic fiber cell growth

(Wang et al., 2023)

2023

G. bickii

Cotyledon

Molecular mechanisms underlying gland morphogenesis

(Sun et al., 2023)

2023

G. hirsutum

Cotyledon

Molecular mechanisms underlying gland morphogenesis

(Long et al., 2023)

2023

G. hirsutum

Leaf

Study terpenoid biosynthesis

(Lin et al., 2023)

2023

G. hirsutum

Hypocotyl and callus

Mechanisms underlying somatic embryogenesis and plant regeneration

(Zhu et al., 2023)

2024

G. hirsutum

Nonembryogenic calli (NEC) and primary embryogenic calli (PEC) tissues

Mechanisms underlying somatic embryogenesis and plant regeneration

(Guo et al., 2024)

2024

G. hirsutum

Anther

Spatial expression atlas and regulatory dynamics during anther development, and anther response to high temperature

(Li et al., 2024b)

2024

G. arboreum

Root

Transcriptional landscape of cotton roots in response to salinity stress

(Li et al., 2024a)