Table 1 Information of the GASA genes in G. hirsutum
From: Identification, characterization, and expression profiles of the GASA genes in cotton
Gene name | Sequence ID | Chromosome | Protein Length /aa | CDS Length /bp | Gene position | MW /Da | pI | Subcellular prediction | Accession number |
|---|---|---|---|---|---|---|---|---|---|
GhGASA1 | GH_A02G0648.1 | A02(−) | 103 | 312 | 9 191 049–9 191 443 | 11 234.2 | 8.56 | Extracellular | MW429289 |
GhGASA2 | GH_A02G1291.1 | A02(+) | 119 | 360 | 55 425 153–55 426 696 | 13 079.3 | 8.69 | Extracellular | MW429290 |
GhGASA3 | GH_A04G1429.1 | A04(+) | 88 | 267 | 84 442 850–84 443 222 | 9 863.7 | 8.44 | Extracellular | MW429291 |
GhGASA4 | GH_A05G1862.1 | A05(+) | 102 | 309 | 17 547 630–17 548 124 | 10 775.6 | 8.7 | Extracellular | MW429292 |
GhGASA5 | GH_A05G2086.1 | A05(−) | 88 | 267 | 19 997 476–19 997 844 | 10 086.9 | 8.55 | Extracellular | MW429293 |
GhGASA6 | GH_A05G2637.1 | A05(−) | 86 | 261 | 28 125 670–28 126 046 | 9 466.4 | 9.5 | Extracellular | MW429294 |
GhGASA7 | GH_A05G2768.1 | A05(−) | 90 | 273 | 30 654 351–30 654 812 | 9 759.6 | 8.06 | Extracellular | MW429295 |
GhGASA8 | GH_A05G3865.1 | A05(+) | 106 | 321 | 101 587 855–101 588 525 | 11 895 | 9.22 | Extracellular | MW429296 |
GhGASA9/GhGASL1 | GH_A06G0035.1 | A06(+) | 102 | 309 | 250 147–250 553 | 10 668.5 | 9.18 | Extracellular | MW429297 |
GhGASA10 | GH_A06G0037.1 | A06(+) | 104 | 315 | 254 660–255 177 | 11 326 | 6.44 | Extracellular | MW429298 |
GhGASA11 | GH_A06G0225.1 | A06(−) | 88 | 267 | 2 296 267–2 296 753 | 9 646.4 | 8.25 | Extracellular | MW429299 |
GhGASA12 | GH_A07G0862.1 | A07(−) | 105 | 318 | 11 202 685–11 204 347 | 11 867.9 | 9.14 | Extracellular | MW429300 |
GhGASA13/GhGASL4 | GH_A07G2469.1 | A07(−) | 264 | 795 | 94 606 844–94 608 048 | 27 763.7 | 10.44 | Nuclear, Plasma Membrane | MW429301 |
GhGASA14/GhGASL2 | GH_A09G0176.1 | A09(−) | 106 | 321 | 3 985 530–3 986 221 | 11 945 | 9.08 | Extracellular | MW429302 |
GhGASA15 | GH_A09G0286.1 | A09(−) | 213 | 642 | 7 457 030–7 458 016 | 23 064 | 9.02 | Nuclear, Extracellular, Plasma Membrane | MW429303 |
GhGASA16 | GH_A09G1863.1 | A09(−) | 112 | 339 | 75 508 595–75 509 153 | 11 903 | 8.75 | Extracellular | MW429304 |
GhGASA17 | GH_A10G1353.1 | A10(−) | 76 | 231 | 68 911 818–68912048 | 8 982.4 | 8.81 | Extracellular | MW429305 |
GhGASA18 | GH_A11G2325.1 | A11(+) | 97 | 294 | 62 945 933–62 946 385 | 10 450.2 | 8.61 | Extracellular | MW429306 |
GhGASA19 | GH_A12G0598.1 | A12(+) | 103 | 312 | 13 285 723–13 286 200 | 11 079.8 | 8.44 | Extracellular | MW429307 |
GhGASA20 | GH_D02G0660.1 | D02(−) | 101 | 306 | 8 705 229–8 705 622 | 11 010.9 | 8.56 | Extracellular | MW429308 |
GhGASA21 | GH_D02G2258.1 | D02(+) | 90 | 273 | 67 179 221–67 179 588 | 10 071.1 | 9.04 | Extracellular | MW429309 |
GhGASA22 | GH_D03G0268.1 | D03(−) | 112 | 339 | 2 569 723–2 570 204 | 12 224.4 | 9.3 | Extracellular | MW429310 |
GhGASA23/GhGASL5 | GH_D04G0496.1 | D04(−) | 106 | 321 | 7 607 854–7 608 525 | 11 825.9 | 9.07 | Extracellular | MW429311 |
GhGASA24/GhGASL3 | GH_D04G1773.1 | D04(+) | 90 | 273 | 53 548 230–53 548 599 | 10 064.9 | 8.55 | Extracellular | MW429312 |
GhGASA25 | GH_D05G1900.1 | D05(+) | 102 | 309 | 16 130 361–16 130 855 | 10 715.6 | 8.84 | Extracellular | MW429313 |
GhGASA26 | GH_D05G1901.1 | D05(+) | 103 | 312 | 16 132 289–16 132 796 | 11 548.3 | 8.15 | Extracellular | MW429314 |
GhGASA27 | GH_D05G2117.1 | D05(−) | 88 | 267 | 18 147 149–18 147 531 | 10 086.9 | 8.55 | Extracellular | MW429315 |
GhGASA28 | GH_D05G2661.1 | D05(−) | 86 | 261 | 24 666 254–24 666 629 | 9 452.4 | 9.5 | Extracellular | MW429316 |
GhGASA29 | GH_D05G2783.1 | D05(−) | 90 | 273 | 26 448 762–26 449 224 | 9 758.7 | 8.32 | Extracellular | MW429317 |
GhGASA30 | GH_D05G2784.1 | D05(−) | 90 | 273 | 26 470 771–26 471 233 | 9 758.7 | 8.32 | Extracellular | MW429318 |
GhGASA31 | GH_D06G0022.1 | D06(+) | 102 | 309 | 134 310–134 720 | 10 591.5 | 9.19 | Extracellular | MW429319 |
GhGASA32 | GH_D06G0024.1 | D06(+) | 104 | 315 | 141 982–142 488 | 11 342 | 6.44 | Extracellular | MW429320 |
GhGASA33/GhGASL6 | GH_D06G0209.1 | D06(−) | 88 | 267 | 2 047 165–2 047 637 | 9 678.4 | 8.25 | Extracellular | MW429321 |
GhGASA34 | GH_D07G0864.1 | D07(−) | 96 | 291 | 9 661 192–9 662 681 | 10 563.4 | 8.97 | Extracellular | MW429322 |
GhGASA35 | GH_D09G0292.1 | D09(−) | 190 | 573 | 7 330 104–7 331 019 | 20 669.2 | 9.29 | Extracellular, Nuclear, Plasma Membrane | MW429323 |
GhGASA36 | GH_D09G1817.1 | D09(−) | 112 | 339 | 45 112 430–45 112 988 | 11 933.9 | 8.38 | Extracellular | MW429324 |
GhGASA37 | GH_D11G2128.1 | D11(−) | 97 | 294 | 26 171 794–26 172 246 | 10 406.1 | 8.68 | Extracellular | MW429325 |
GhGASA38 | GH_D12G0617.1 | D12(+) | 103 | 312 | 10 310 554–10 311 031 | 10 957.7 | 8.43 | Extracellular | MW429326 |